Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines13-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: 1cf9d36386f550159bfeeb751763167df5022234 |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
https://github.com/datirium/workflows.git
Path: subworkflows/heatmap-prepare.cwl Branch/Commit ID: e433136aecc9447bce63ad1363a67a8a356fd13c |
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scatter-valuefrom-wf2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf2.cwl Branch/Commit ID: 4a31f2a1c1163492ae37bbc748a299e8318c462c |
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cache_asnb_entries
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367 |
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linc_target.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/linc_target.cwl Branch/Commit ID: a94862bb3d50860cd348a5d5d1aa76fa0cde332a |
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scatter2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/scatter2.cwl Branch/Commit ID: baa668bc96ade54607465d21bc6cfa15c9bff13c |
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count-lines3-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 62ae25772a8e98b6591554882daa3f3758079fca |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 0d9e6bb52eac0c209af3977aa779e39aaa432458 |
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Super-enhancer post ChIP-Seq analysis
Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff) |
https://github.com/datirium/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: 9b4dc225c537685b9c9a32d931d3892d20953dd7 |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 89098668413e90519c99b35143bffec509d3599c |
