Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bam to trimmed fastqs and HISAT alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: 5677d6df78453e62d2e78ab485f216feaef91681
workflow graph giab_haplotypecaller.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/giab_haplotypecaller.cwl

Branch/Commit ID: c84973e6e96d5232152a87bdd40ee8f5bab470c0
workflow graph 04-peakcall-se.cwl

ATAC-seq 04 quantification - SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl

Branch/Commit ID: 81555a89cc2d16bd3ab131a6685a44b44f08f927
workflow graph count-lines3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines3-wf.cwl

Branch/Commit ID: 31bda22357987171f02ae6513fcc26e011e6afed
workflow graph align_sort_sa

https://github.com/ncbi/pgap.git

Path: task_types/tt_align_sort_sa.cwl

Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19
workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq.cwl

Branch/Commit ID: 026bba9511561246ad65458f0f55c88cead26fbd
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/gathered_somatic_exome.cwl

Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae
workflow graph dynresreq-workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/dynresreq-workflow.cwl

Branch/Commit ID: 19f2cb6e21db8624155c7e253b89c57df536fcc1
workflow graph LBA_calibrator.cwl

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/LBA_calibrator.cwl

Branch/Commit ID: 0c5bd78e3f2d08564f5c9a563bcc8bb7704e6202
workflow graph cond-wf-010.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-010.cwl

Branch/Commit ID: 979083396fee912fca8ef778174216d317338a00