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Showing results for "rnaseq" (Show all)
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
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rnaseq-alignment-quantification
This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/RNA-Seq/rnaseq-quantification-qc.cwl Branch/Commit ID: 8967e816cb89dd9349c8c6deff686aeb8b118f1c |
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rnaseq-alignment-quantification-nosplice
This workflow QC, alignment and quantification from TPMCalculator for not spliced genomes |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/RNA-Seq/rnaseq-alignment-quantification_nosplice.cwl Branch/Commit ID: e541470bc9d0b064bc4ed7dd2b45d8ec67760613 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb |
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trim-rnaseq-se-dutp.cwl
Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-rnaseq-se-dutp.cwl Branch/Commit ID: 801f7b363e0599b9a28ecda696dfdb1c0e40ce71 |
