Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines11-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines11-wf.cwl Branch/Commit ID: 0db44e3c9805a070564f954222efff71cd791b70 |
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ATAC-Seq peak caller workflow for single-end samples
This workflow execute peak caller a ATAC-Seq with pseudo samples |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/peak_caller_with_pseudo_replicates-control.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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Subworkflow to allow calling cnvkit with cram instead of bam files
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 88f1e02b261bf9ce882eba306b6245c64328632b |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad |
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genotypegvcfs.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/variant_calling/genotypegvcfs.cwl Branch/Commit ID: 3657003ce9fafd0e1916914ec5bf5fd3f28aedaf |
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scatter-valuefrom-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf1.cwl Branch/Commit ID: bfe56f3138e9e6fc0b9b8c06447553d4cea03d59 |
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Create Genomic Collection for Bacterial Pipeline
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https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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phase VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac |
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pass-unconnected.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/pass-unconnected.cwl Branch/Commit ID: 3867f2fa4c204bc99dc664bb3f0ba71e360e142e |
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harmonization_novoalign.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/harmonization_novoalign.cwl Branch/Commit ID: a83f16e804bc36a2823e32fa2fb649ebe2e05f4c |
