Explore Workflows

https://github.com/ncbi/pgap.git

Path: task_types/tt_fscr_calls_pass1.cwl

Branch/Commit ID: 8c21035bff3cbffccf5682bd0357a6d71f3bdb81

https://github.com/hubmapconsortium/codex-pipeline.git

Path: steps/illumination_first_stitching.cwl

Branch/Commit ID: 16794b6359ae24a83226a583c527418ac3d3424f

https://github.com/ncbi/pgap.git

Path: checkm/wf_checkm.cwl

Branch/Commit ID: a1f39f21670be28427ceb91ceaeb9339545c18fc

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/sec-wf-out.cwl

Branch/Commit ID: efd59864c24d97e6d0d1d273025d3ef9003fa44d

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/count-lines7-single-source-wf_v1_2.cwl

Branch/Commit ID: 513bf79c9e3ba98306006a87165de18bac7c04ee

Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl)

https://github.com/Barski-lab/workflows.git

Path: workflows/super-enhancer.cwl

Branch/Commit ID: 94f3486d3867b9ece47c07bc8fe47f57569786f4

Processes Sounder SIPS L1A products into L1B Products

https://github.com/unity-sds/unity-sps-workflows.git

Path: sounder_sips/l1b_package.cwl

Branch/Commit ID: a4fd2d3f33c94071241dcfc7a868aa6facd59dd6

Packed ID: main

https://git.astron.nl/RD/LINC.git

Path: workflows/LBA_target.cwl

Branch/Commit ID: 322fbb6db100df49881edd4d1db4e9a8e7e3715b

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf1_v1_1.cwl

Branch/Commit ID: 513bf79c9e3ba98306006a87165de18bac7c04ee

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: 0209b0b7ce66f03c8498b5a686f8d31690a2acb3