Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph umi molecular alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_molecular_alignment.cwl

Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3
workflow graph spurious_annot

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass1.cwl

Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3
workflow graph contig construction and protein prediction

\"This workflow performs construction of metagenomic contigs and prediction protein sequences for metagenomic contigs. It executes 2 processes: contig construction and protein prediction. related CWL file: ./Tools/06_bwa_mem.cwl ./Tools/07_samtools_sort.cwl ./Tools/08_samtools_flagstat.cwl\"

https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git

Path: Workflow/metagenomic_contig_mapping_sw.cwl

Branch/Commit ID: 1838569c1d6d3c15f58c254667d4c6258e67e5a6
workflow graph Spectral_counting_workflow.cwl

https://github.com/adamscharlotte/CWL-workflow.git

Path: Spectral_counting_workflow.cwl

Branch/Commit ID: 90e89d0feac36a1cadbac0625a32ff6b1ee715fb
workflow graph Filter Protein Seeds; Find ProSplign Alignments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_compart_filter_prosplign.cwl

Branch/Commit ID: 068222510fdab75046c7f733a0cc919e36744ade
workflow graph bact_get_kmer_reference

https://github.com/ncbi/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496
workflow graph assm_assm_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_assm_assm_blastn_wnode.cwl

Branch/Commit ID: 861d9baa067af98d794ba0ed4e43aa42e37d8a24
workflow graph Nested workflow example

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/nested.cwl

Branch/Commit ID: fc6ca8b1498926f705dcfde7ab0a365bd09a9675
workflow graph align_sort_sa

https://github.com/ncbi/pgap.git

Path: task_types/tt_align_sort_sa.cwl

Branch/Commit ID: ddd1e2c08590d809c5cf325e32d596861878e6f8