Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Bisulfite alignment and QC
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
|
|
|
ani_top_n
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31 |
|
|
|
Running cellranger count and lineage inference
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: ffab5424bb8b5905aecf6f8e2e6387da7f3df562 |
|
|
|
1st-workflow.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/1st-workflow.cwl Branch/Commit ID: c6cced7a2e6389d2eb43342e702677ccb7c7497c |
|
|
|
kmer_top_n
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 251343ee5b7586ba2cf89458555f1da87a7558f2 |
|
|
|
kfdrc_sentieon_gvcf_wf.cwl
|
https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/kfdrc_sentieon_gvcf_wf.cwl Branch/Commit ID: a7e45d17fb56ead5a4c65628689915316341fbde |
|
|
|
bulk_analysis.cwl
|
https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_analysis.cwl Branch/Commit ID: d0e845df600fff7944943e2520db7a0cda8d00db |
|
|
|
tt_blastn_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31 |
|
|
|
PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
env-wf3.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 526f36f93655bfb098f766ff020708b5a707513a |
