Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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abundance
abundace profiles from annotated files, for protein and/or rna |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/abundance.workflow.cwl Branch/Commit ID: 2addcde0f4c1c8547f7f3906c2523cded23e9869 |
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step-valuefrom2-wf_v1_0.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/step-valuefrom2-wf_v1_0.cwl Branch/Commit ID: 124a08ce3389eb49066c34a4163cbbed210a0355 |
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protein similarities
run diamond on mutlple DBs and merge-sort results |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-diamond.workflow.cwl Branch/Commit ID: 2addcde0f4c1c8547f7f3906c2523cded23e9869 |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/Barski-lab/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: d09a44ebc8d092ffd8370a324c9e84b37a593d38 |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: f21b6c6f70f01d0fe08193684060161107f0bf59 |
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count-lines3-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 2256a30d0c1365b30e0a7338fb883c74674fcd25 |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: cec32f5b60c1d048257e3c3daed6912d5d2a054e |
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Hello World
Outputs a message using echo |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/hello-workflow.cwl Branch/Commit ID: ecdfe1ee769d05790f70ac87a711131f441f3753 |
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md5sum.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/md5sum.cwl Branch/Commit ID: 0ad6983898f0d9001fe0f416f97c4d8b940e384a |
