Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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step-valuefrom5-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/step-valuefrom5-wf.cwl Branch/Commit ID: 31bda22357987171f02ae6513fcc26e011e6afed |
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bulk scRNA-seq pipeline using Salmon
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: bulk-pipeline.cwl Branch/Commit ID: 81e4484986251c48e3edbf5e1f141ab68677b8bd |
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harmonization_bwa_mem_no_trim.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem_no_trim.cwl Branch/Commit ID: 39ddc4b79dc93076787046f591225dc7ca3100ce |
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timelimit-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/timelimit-wf.cwl Branch/Commit ID: 7d7986a6e852ca6e3239c96d3a05dd536c76c903 |
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checkm
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https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: 192b813eed8c0d368e69057cb39415175dd15128 |
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inp_update_wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/inp_update_wf.cwl Branch/Commit ID: 31bda22357987171f02ae6513fcc26e011e6afed |
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merge-bam-parallel
This workflow merge BAM files per condition in parallel |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 00d21c7c7b35e4da3d272540f7356e9a63798442 |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 192b813eed8c0d368e69057cb39415175dd15128 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 6a29751f2b16659c1592f1e94837c989e68f3b8b |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 192b813eed8c0d368e69057cb39415175dd15128 |
