Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wf_bam_to_bigwig.cwl
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https://github.com/YeoLab/sailor.git
Path: cwl/wf_bam_to_bigwig.cwl Branch/Commit ID: master |
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pipeline.cwl
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https://github.com/hubmapconsortium/azimuth-annotate.git
Path: pipeline.cwl Branch/Commit ID: 2e4017d |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: test |
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TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)
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https://github.com/EBI-Metagenomics/workflow-is-cwl.git
Path: workflows/TransDecoder-v5-wf-2steps.cwl Branch/Commit ID: assembly |
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qiime2 identify differentially abundant features
Differential abundance testing with ANCOM from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-09-ancom.cwl |
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test-workflow.cwl
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https://github.com/hacchy1983/CWL-workflows.git
Path: Workflows/test-workflow.cwl Branch/Commit ID: master |
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rhapsody_targeted_1.9-beta.cwl#VDJ_ig.cwl
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https://github.com/longbow0/cwl.git
Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl Branch/Commit ID: master Packed ID: VDJ_ig.cwl |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: c211071 |
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Single-cell RNA-Seq Alignment
Single-cell RNA-Seq Alignment Runs Cell Ranger Count to quantify gene expression from a single-cell RNA-Seq library. |
https://github.com/Barski-lab/sc-seq-analysis.git
Path: workflows/sc-rna-align-wf.cwl Branch/Commit ID: main |
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psortedDefaultParams.cwl
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https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git
Path: steps/psortedDefaultParams.cwl Branch/Commit ID: master |
