Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Per-chromosome pindel

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: pindel/pindel_cat.cwl

Branch/Commit ID: master
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: 163fd2d
workflow graph wf_multiple_writers5.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/additional_test_cases/wf_multiple_writers5.cwl

Branch/Commit ID: master
workflow graph Report generation workflow

https://github.com/arvados/arvados-tutorial.git

Path: WGS-processing/cwl/helper/report-wf.cwl

Branch/Commit ID: main
workflow graph bwameth_align_merge_sort_dedup.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/bwameth/tools/bwameth_align_merge_sort_dedup.cwl

Branch/Commit ID: main
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 5e82174
workflow graph bwa-mem-sort-distr.cwl

https://github.com/sentieon/sentieon-cwl.git

Path: stage/bwa-mem-sort-distr.cwl

Branch/Commit ID: master
workflow graph preprocess.cwl

https://github.com/klimstef/testing-for-Haqseq.git

Path: cwl_s/preprocess.cwl

Branch/Commit ID: master
workflow graph stage_data_workflow.vcf_to_aliquot_maf.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/stage_data_workflow.vcf_to_aliquot_maf.cwl

Branch/Commit ID: main
workflow graph vcf_to_aliquot_maf_wf.cwl

This copy is for use with the new merged panel of normals

 https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/vcf_to_aliquot_maf_wf.cwl

Branch/Commit ID: main