Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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dynresreq-workflow-stepdefault.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/dynresreq-workflow-stepdefault.cwl Branch/Commit ID: 9a23706ec061c5d2c02ff60238d218aadf0b5db9 |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 1844de830f6935901849ccd9966685fbf13e8042 |
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1st-workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/1st-workflow.cwl Branch/Commit ID: a3d565bf8e630101d25d31804cfbceb0a0ba28de |
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assm_assm_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: 8ea3637b0f11eac1ea5599c41d74e00d85fb778d |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 3ee63d8757c341ca98b3b46ec4782862ad19b710 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 3ee63d8757c341ca98b3b46ec4782862ad19b710 |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 3ee63d8757c341ca98b3b46ec4782862ad19b710 |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 0a9a4ce83b49ed4e7eee5bcc09d83725136a36b0 |
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Unaligned BAM to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: e59c77629936fad069007ba642cad49fef7ad29f |
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pindel parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 3ee63d8757c341ca98b3b46ec4782862ad19b710 |
