Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: bffea7fd5e864c5221c13a815d00d0a2fad178cc
workflow graph spatial transcriptomics pipeline including analysis with scanpy and squidpy

https://github.com/hubmapconsortium/xenium-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: 3a861e0dda09983a89e7ab48ab57c16d07e75dbe
workflow graph cache_test_workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/cache_test_workflow.cwl

Branch/Commit ID: 22bc7d80dd524767b7d7d115747556ac62c27e9f
workflow graph wgs alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/tumor_only_wgs.cwl

Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622
workflow graph tt_fscr_calls_pass1

https://github.com/ncbi/pgap.git

Path: task_types/tt_fscr_calls_pass1.cwl

Branch/Commit ID: 4b8d11048f1047140b337a2cac6503d80a22d683
workflow graph trnascan_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_scan_and_dump.cwl

Branch/Commit ID: 681555881cbdf95a1f4c29f6dc272eb6ca8e4d60
workflow graph packed_no_main.cwl#collision

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/packed_no_main.cwl

Branch/Commit ID: 8b0cacc5510eb3eed4e6d6db4bb844cc6114b1dc

Packed ID: collision
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/pvacseq.cwl

Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
workflow graph mut2.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mut2.cwl

Branch/Commit ID: a21728aa0e2dd0ffc1be39fdbf9bc76029e90c66
workflow graph scatter-wf2_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf2_v1_2.cwl

Branch/Commit ID: afc644e143c697aefc006e7b94bc460e594fc588