Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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1st-workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/1st-workflow.cwl Branch/Commit ID: d3c7bd5d6c409e857b98f9034a55952ca95afdb3 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 69c0f25d08cfa02d8bfaa85ce5d70dd14cc52e3f |
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basename-fields-test.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl Branch/Commit ID: 321949b22d1c9344a5f187d7c4579786ac1ed473 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: a33936cca222084cf68e00076255359688b6708a |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/revsort.cwl Branch/Commit ID: 6e9f82a6d2195d4f16f28fd6e1485138372fb430 |
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BuildCembaReferences.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/BuildCembaReferences.cwl Branch/Commit ID: 95fb3e295823bd124b017b6c063d224fbd28457d |
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Remove primers
remove specified primer in input sequences using cutadpt |
https://github.com/MG-RAST/amplicon.git
Path: CWL/Workflows/remove_euk_prok_primer.workflow.cwl Branch/Commit ID: 67fc58a072d6a72658a54244f6dded172f57314c |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
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post_assembly.cwl
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https://github.com/EBI-Metagenomics/CWL-assembly.git
Path: cwl/wrapper/post_assembly.cwl Branch/Commit ID: ed2dfc3eaf01e06bc67413496a26c85e3511276e |
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ChIP-seq peak caller workflow MACS2 based
This workflow execute peak caller and QC for ChIP-seq using MACS2 |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/peak-calling-MACS2-genome-size.cwl Branch/Commit ID: b5a440939ac6022ee81aeeb0dd7daf3983228a61 |
