Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: ffab5424bb8b5905aecf6f8e2e6387da7f3df562 |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383 |
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cond-wf-011.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-wf-011.cwl Branch/Commit ID: a5073143db4155e05df8d2e7eb59d9e62acd65a5 |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: be32f1363f9a9a9247d738e9593b207e9c5172c8 |
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extract_readgroup_fastq_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede |
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Replace legacy AML Trio Assay
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/cle_aml_trio.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc |
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Interval overlapping alignments counts
Interval overlapping alignments counts ====================================== Reports the count of alignments from multiple samples that overlap specific intervals. |
https://github.com/datirium/workflows.git
Path: workflows/bedtools-multicov.cwl Branch/Commit ID: 7ced5a5259dbd8b3fc64456beaeffd44f4a24081 |
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output-arrays-file-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/output-arrays-file-wf.cwl Branch/Commit ID: 1f3ef888d9ef2306c828065c460c1800604f0de4 |
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extract_readgroup_fastq_pe_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_pe_http.cwl Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede |
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extract_readgroups_bam_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede |
