Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	WGS QC workflow mouse	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs_mouse.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Alignment without BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f