Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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LSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/LSU-from-tablehits.cwl Branch/Commit ID: f914942 |
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js-expr-req-wf.cwl#wf
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/js-expr-req-wf.cwl Branch/Commit ID: master Packed ID: wf |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 5833078 |
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fusion_simulation_workflow.cwl
Fusion Simulation Workflow |
https://github.com/Sage-Bionetworks/rnaseqSim.git
Path: workflow/fusion_simulation_workflow.cwl Branch/Commit ID: master |
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bulk_process.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_process.cwl Branch/Commit ID: develop |
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wf_clipseqcore_pe_2barcodes.cwl
Workflow for handling reads containing two barcodes. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs |
https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_pe_2barcodes.cwl Branch/Commit ID: master |
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EMG assembly for paired end Illumina
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 56dafa4 |
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Unaligned bam to sorted, markduped bam
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: master |
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fp_filter workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: downsample_and_recall |
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dummy.cwl
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https://github.com/NCBI-Hackathons/Epigenomics_CWL.git
Path: cwl/workflows/dummy.cwl Branch/Commit ID: master |
