Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph per_cluster_workflow.cwl

https://github.com/FarahZKhan/scalability-reproducibility-chapter.git

Path: CWL/per_cluster_workflow.cwl

Branch/Commit ID: f0b553d37e4255a3291393948f3e308bd88ed301
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: caea457b17388fdc5cb088364c194504ae736bdd
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: a8abd0e66de7b5ffe24cfe7f39d7027103c6d3b4
workflow graph pcawg_annotate_wf.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git

Path: pcawg_annotate_wf.cwl

Branch/Commit ID: b4a02b7ba5733b3cc5b84b79ab0634ff9e4d1aeb
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: c2110714be230861ee7b96adc3db6e32e5248c57
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: c1f8b22dc4da88c998cb00f4b2bebdff8c3632d7
workflow graph checker_workflow_wrapping_workflow.cwl

This demonstrates how to wrap a \"real\" workflow with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/dockstore-testing/dockstore-workflow-md5sum-unified.git

Path: checker_workflow_wrapping_workflow.cwl

Branch/Commit ID: 82f37121c2b8be9529f8ee6f104a0c198c16c173
workflow graph metaphlan_wfl.cwl

https://github.com/stevetsa/Metaphlan-SBCGC.git

Path: metaphlan_wfl.cwl

Branch/Commit ID: 9b824c91cebb726f8e7d87c5f1f5760333fed9be
workflow graph wf_demultiplex_pe.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_demultiplex_pe.cwl

Branch/Commit ID: 768f21a16794479b36af28bdf4fb00971afa6192
workflow graph echo-wc_inline.cwl

Counts words of a message via echo and wc

 https://github.com/NLeSC/scriptcwl.git

Path: tests/data/workflows/echo-wc_inline.cwl

Branch/Commit ID: 56274fd44550c65385a1ab127402b7339fc18043