Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph snp_callers_workflow.cwl

A workflow for running MuSe, MuTect, SomaticSniper, and Pindel. See [the github repository](https://github.com/BD2KGenomics/dockstore_workflow_snps) for details.

https://github.com/BD2KGenomics/dockstore_workflow_snps.git

Path: snp_callers_workflow.cwl

Branch/Commit ID: 8c8217b63d16c13924a00408e2b621d888b0aaa5
workflow graph sidearm.cwl

https://github.com/NCBI-Hackathons/Virus_Detection_SRA.git

Path: cwl/tools/sidearm.cwl

Branch/Commit ID: 0c62c1f52cd9530d7a51435dab9e23efe2be96c3
workflow graph 5S-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/5S-from-tablehits.cwl

Branch/Commit ID: 5dc7c5ca618a248a99bd4bf5f3042cdb21947193
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 3b602cb35bf68b9a3b2e16fe9ac4c3e2a9d8fdae
workflow graph ProGENI

network-guided gene prioritization method implementation by KnowEnG that ranks gene measurements by their correlation to observed phenotypes

 https://github.com/KnowEnG/cwl-gene-prioritization.git

Path: gp_workflow.cwl

Branch/Commit ID: c490b21749bdd56691f0acf0e5f3a1dddfebfeea
workflow graph repliseq-parta.cwl

https://github.com/4dn-dcic/pipelines-cwl.git

Path: cwl_awsem_v1/repliseq/repliseq-parta.cwl

Branch/Commit ID: c0c0aba5d8f23c49c2a47317b4b6ac994f00ea59
workflow graph cmsearch-multimodel.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: 43d2fb8a5430dc56b55e84e3986d0079cad8d185
workflow graph prok-annotation-cheetah.cwl

https://github.com/mr-c/gales.git

Path: cwl/workflows/prok-annotation-cheetah.cwl

Branch/Commit ID: f4faa8acf34fba5e2ef746ab4302cbe6f8f6b083
workflow graph wf_gen_paleocar_model3.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/gen_paleocar_models/wf_gen_paleocar_model3.cwl

Branch/Commit ID: cd1454539fc62c7a9a66de56459610728dec8baa
workflow graph workflow_docker.cwl

[![Docker Repository on Quay](https://quay.io/repository/ratschlab/workflow-experiment/status \"Docker Repository on Quay\")](https://quay.io/repository/ratschlab/workflow-experiment) Very simple and very artifical workflow to experiment with containers and cwl.

https://github.com/ratschlab/tools-cwl-workflow-experiments.git

Path: cwl/workflow_docker.cwl

Branch/Commit ID: dafd2d4f966cb2fb2d9df050432a88f01e962202