Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: a858bb4db58ef2df17b4856294ad7904643c5c6e
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 251343ee5b7586ba2cf89458555f1da87a7558f2
	metrics.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/metrics.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de
	bwa_se.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/mirnaseq/integrity.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de
	secret_wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/secret_wf.cwl Branch/Commit ID: 216fbe57afcf67d81c99b49c1aa3aee0844f0a6a