Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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variantcalling_trimmed_mutectnopon_workflow.cwl
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https://github.com/teoloup/cwltools.git
Path: variantcalling_trimmed_mutectnopon_workflow.cwl Branch/Commit ID: 2485f0ecf1f7e6cd57e45ef13fddebbc508b77d4 |
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protein annotation
Proteins - predict, filter, cluster, identify, annotate |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-filter-annotation.workflow.cwl Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319 |
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basename-fields-test.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/basename-fields-test.cwl Branch/Commit ID: a5073143db4155e05df8d2e7eb59d9e62acd65a5 |
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umi molecular alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/umi_molecular_alignment.cwl Branch/Commit ID: 68eda647259849ca81ac0bb07a24bc8a4465a630 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32 |
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cond-wf-006_nojs.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-wf-006_nojs.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2 |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/revsort.cwl Branch/Commit ID: f8f24046875aa90764cf54736df926363aa326d1 |
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amplicon_metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/amplicon_metrics.cwl Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 932da3abed7166bd5a962871386ba2c31d47b85c |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 669166450aba26f3560c15960eeebdd0313a7f84 |
