Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph gdc_dnaseq_ar_workflow.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: subworkflows/main/gdc_dnaseq_ar_workflow.cwl

Branch/Commit ID: 4362aa022f814c89addb876092dce8291b2edc13
workflow graph rRNA annotation workflow with scatter processing

\"This workflow performs rRNA annotation processing for multiple index files using scatter. It executes 4 processes: makeblastdb, blastn alignment, filtering, and rRNA removal for each rRNA index file. related CWL file: ./Tools/09_makeblastdb_rRNA.cwl ./Tools/10_blastn_rRNA_alignment.cwl ./Tools/10_blastn_rRNA_filter1.cwl ./Tools/10_blastn_rRNA_filter2.cwl ./Tools/10_blastn_rRNA_filter3.cwl\"

https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git

Path: Workflow/blastn_rRNA_ssw.cwl

Branch/Commit ID: e062424fbea28f174342f99fd2518237b1d26c32
workflow graph rRNA annotation workflow with scatter processing

\"This workflow performs rRNA annotation processing for multiple index files using scatter. It executes 4 processes: makeblastdb, blastn alignment, filtering, and rRNA removal for each rRNA index file. related CWL file: ./Tools/09_makeblastdb_rRNA.cwl ./Tools/10_blastn_rRNA_alignment.cwl ./Tools/10_blastn_rRNA_filter1.cwl ./Tools/10_blastn_rRNA_filter2.cwl ./Tools/10_blastn_rRNA_filter3.cwl\"

https://github.com/RyoMameda/workflow_cwl.git

Path: Workflow/blastn_rRNA_ssw.cwl

Branch/Commit ID: e062424fbea28f174342f99fd2518237b1d26c32
workflow graph js-expr-req-wf.cwl#wf

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/js-expr-req-wf.cwl

Branch/Commit ID: ebd041f35a1179668e9a7490249d651a6cc034b7

Packed ID: wf
workflow graph contig construction and protein prediction

\"This workflow performs construction of metagenomic contigs and prediction protein sequences for metagenomic contigs. It executes 2 processes: contig construction and protein prediction. related CWL file: ./Tools/01_megahit.cwl ./Tools/02_rename.cwl ./Tools/03_seqkit_stats.cwl ./Tools/04_prodigal.cwl\"

https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git

Path: Workflow/megahit_prodigal_sw.cwl

Branch/Commit ID: e062424fbea28f174342f99fd2518237b1d26c32
workflow graph kmer_cache_retrieve

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_cache_retrieve.cwl

Branch/Commit ID: b36faf882851f4bdd926f8c64435cf6f5a3daccd
workflow graph extract_gencoll_ids

https://github.com/ncbi/pgap.git

Path: task_types/tt_extract_gencoll_ids.cwl

Branch/Commit ID: b174aec5dba5524367061a2c60472c318430f4f5
workflow graph HBA_target_VLBI.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/HBA_target_VLBI.cwl

Branch/Commit ID: 5944b0c7a4fb82f4b3f8df422d6f277777c3828e
workflow graph scatter-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/scatter-workflow.cwl

Branch/Commit ID: bc0c68465c0b1b01ea61bd597c8322752732fb1c
workflow graph Optical throughput measurements via muon ring analysis

Upon receiving a new DL0 data product (from either Monte Carlo simulations or observations), DPPS triggers the CalibPipe (ctapipe-process) to process the data using ctapipe, extracting the signal charges and reconstructing muon parameters. The second step involves using the CalibPipe tool to estimate the telescope’s optical throughput using a predefined number of muon events.

https://github.com/burmist-git/076_cwl.git

Path: uc-optical-throughput-calibration-with-muons.cwl

Branch/Commit ID: a9d49ac23a6e14f475e277ef11f54f40124ab1ef