Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416 |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: f10de890d1d2271299931349fa8aea660acef4ee |
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Subworkflow to allow calling cnvkit with cram instead of bam files
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 3b6d0475c80f5e452793a46a38ee188742b86595 |
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count-lines3-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 4df56e95e6fceab69e677b539f3532cbf5946197 |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea |
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bam_readcount workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 0514ffe248dd11068a3f2268bc67b6ce5ab051d2 |
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scatter-wf2.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf2.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33 |
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extract_gencoll_ids
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86 |
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Per-region pindel
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416 |
