Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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trim-rnaseq-se-dutp.cwl
Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-rnaseq-se-dutp.cwl Branch/Commit ID: 0d919fc3a2f4e4c105142df04d74ac934e3c8c03 |
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kfdrc_sentieon_gvcf_wf.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/kfdrc_sentieon_gvcf_wf.cwl Branch/Commit ID: 43d7b79b07b8948c879b9bf97aeec461c79492d2 |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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assm_assm_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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Water body detection based on NDWI and the otsu threshold
Water bodies detection based on NDWI and otsu threshold applied to Sentinel-2 or Landsat-9 staged acquisitions |
https://github.com/eoap/mastering-app-package.git
Path: cwl-workflow/app-water-body.cwl Branch/Commit ID: 4f1cc093416d60da0e9513fd211bf4c80f67c97a Packed ID: water-bodies |
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ChIP-seq peak caller workflow MACS2 based
This workflow execute peak caller and QC for ChIP-seq using MACS2 |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/peak-calling-MACS2.cwl Branch/Commit ID: 3247592a89deafaa0d9c5910a1cb1d000ef9b098 |
