Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f
	BioExcel-CWL-firstWorkflow.cwl	https://github.com/bioexcel/biobb_wf_cwl_tutorial.git Path: biobb_wf_cwl_tutorial/examples/BioExcel-CWL-firstWorkflow.cwl Branch/Commit ID: d760a4e30c0838376ebbbf3110bda824544b89aa
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0
	gcaccess_from_list	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: f1d8909df368a704f094bf73fd734f34e3d7d36a
	umi molecular alignment fastq workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_umi_molecular.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a
	sec-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c
	gcaccess_from_list	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236