Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Trim and reformat reads (single and paired end version)
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/trim_and_reformat_reads.cwl Branch/Commit ID: bcfe5f9affd23d52467f69b4b21d1098f0ca95d7 |
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Filter Protein Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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Seed Search Compartments
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_seed.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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Varscan Workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: varscan/workflow.cwl Branch/Commit ID: 8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb |
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transform_mirna.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/transform_mirna.cwl Branch/Commit ID: 14558b578bad217685ae3c4807ead2a4392d0319 |
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strelka workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: strelka/workflow.cwl Branch/Commit ID: 8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb |
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Filter Protein Seeds I; Find ProSplign Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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Seed Protein Alignments I
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https://github.com/ncbi-gpipe/pgap.git
Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b |
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mutect parallel workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: mutect/workflow.cwl Branch/Commit ID: 8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb |
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extract_amplicon_kit_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_amplicon_kit_http.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
