Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
EMG assembly for paired end Illumina
|
https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl Branch/Commit ID: master |
|
|
|
1st-workflow.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/1st-workflow.cwl Branch/Commit ID: 8ef515037de411abd2f84b569ad4d4a4f7a2c7a0 |
|
|
|
align_sort_sa
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: ca75d68eb74c93b35b404ec7908dc5b260e16466 |
|
|
|
format_rrnas_from_seq_entry
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 9e43bc5cff985574e1f8135d4c50b5a347517c9e |
|
|
|
gathered exome alignment and somatic variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9 |
|
|
|
workflow-fasta-pratt.cwl
|
https://github.com/ebi-jdispatcher/webservice-cwl.git
Path: workflows/workflow-fasta-pratt.cwl Branch/Commit ID: 88b9948c4977ca90ab5ceb391b2235043135480d |
|
|
|
Functional analyis of sequences that match the 16S SSU
|
https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: master |
|
|
|
mutect panel-of-normals workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/panel_of_normals.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115 |
|
|
|
Bisulfite alignment and QC
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
|
|
|
downsample unaligned BAM and align
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: ec45fad68ca10fb64d5c58e704991b146dc31d28 |
