Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580 |
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extract_amplicon_kit_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_amplicon_kit_http.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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mixed_library_metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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Execute CRISPR
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https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199 |
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Creates a FASTJ file per path for each named GVCF
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https://github.com/curoverse/l7g.git
Path: cwl-version/convert2fastj/gvcf_version/cwl/tiling_convert2fastj_gvcf_named.cwl Branch/Commit ID: c1ccad9f81cd3fc44a9f6e8d3b27acb154ba03cc |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac |
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xenbase-fastq-bowtie-bigwig-se-pe.cwl
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https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl Branch/Commit ID: d47fdb25c56124dadd33b05a90273f64064d69e4 |
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extract_readgroups_bam_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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extract_readgroup_fastq_se_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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bam-bedgraph-bigwig.cwl
Workflow converts input BAM file into bigWig and bedGraph files |
https://github.com/datirium/workflows.git
Path: subworkflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: 9a2c389364674221fab3f0f6afdda799e6aa3247 |
