Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	iwdr_with_nested_dirs.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl Branch/Commit ID: ec2cf2da6c31ffedf827a0fb213b5204e172f510
	hisat2_index.cwl	https://github.com/rawgene/cwl.git Path: workflows/hisat2_index.cwl Branch/Commit ID: ff0e5dfe44fb85900b5563ab340de8ad3d952eb5
	bwa-alignment.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/bwa-alignment.cwl Branch/Commit ID: 5964544849c8def80fb47813e34ce185205fda94
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/integrity.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
	module-5	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-5.cwl Branch/Commit ID: 7a2864f5af7723657406e4f3e94f92db09ec90fc
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_download/workflow.cwl Branch/Commit ID: fa1014583e14c522af37ec120f428c3336ac689f
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: 3ed10d0ea7ac57550433a89a92bdbe756bdb0e40
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
	Preprocess fastq Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/preprocess-fastq.workflow.cwl Branch/Commit ID: 091374dc59a23966338638a668ae397d4ee20b2f