Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d |
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HS Metrics workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3 |
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WGS QC workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: qc/workflow_wgs.cwl Branch/Commit ID: e497d1553498eb1c6daecf242ed4fa1375a892fd |
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Varscan Workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/germline_workflow.cwl Branch/Commit ID: e497d1553498eb1c6daecf242ed4fa1375a892fd |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c |
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cache_test_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
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trim-rnaseq-se.cwl
Runs RNA-Seq BioWardrobe basic analysis with single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: 80d64741638b14de5cf58236b6d6d99713c62086 |
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dynresreq-workflow.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/dynresreq-workflow.cwl Branch/Commit ID: 4feec74019b56dc5c51be905a208ff90797661de |
