Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983 |
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abundance
abundace profiles from annotated files, for protein and/or rna |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/abundance-clca.workflow.cwl Branch/Commit ID: 6c5d0068bdb4f19a36a653c39964aefb9e5a7b1b |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8 |
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filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: 7696e7eb27a9251fba53ef4ccacc84cc8f8b0685 |
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bam-bedgraph-bigwig.cwl
Workflow converts input BAM file into bigWig and bedGraph files |
https://github.com/datirium/workflows.git
Path: subworkflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: 7a4593d2fa5b2fcbedc9219dc5687a4bc5aea66a |
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contig LCA
create LCA consistant across input contigs contigs order of precedence - rRNA, single copy gene, LCA of genes |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/contig-lca.workflow.cwl Branch/Commit ID: 091374dc59a23966338638a668ae397d4ee20b2f |
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scatter-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: 8d8512061f2367c90aac67bcbf92af1061b4af59 |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc |
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workflow.cwl
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https://github.com/atanikan/workflow-cwl.git
Path: workflow.cwl Branch/Commit ID: 079f1751c25ee32f3dd1db356a753672e514c045 |
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schemadef-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/schemadef-wf.cwl Branch/Commit ID: 216fbe57afcf67d81c99b49c1aa3aee0844f0a6a |
