Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph star-cufflinks_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/star-cufflinks/single_end/star-cufflinks_wf_se.cwl

Branch/Commit ID: master
workflow graph ani_top_n

https://github.com/ncbi/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: test
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 708fd97
workflow graph hydromt-build-workflow.cwl#hydromt-workflow

https://github.com/jzvolensky/Itwin-tech-meeting.git

Path: example/hydromt/cwl/hydromt-build-workflow.cwl

Branch/Commit ID: main

Packed ID: hydromt-workflow
workflow graph group-isoforms-batch.cwl

Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.

https://github.com/mr-c/datirium-workflows.git

Path: tools/group-isoforms-batch.cwl

Branch/Commit ID: license_test
workflow graph sec-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/sec-wf.cwl

Branch/Commit ID: main
workflow graph main-unito.cwl

https://github.com/alpha-unito/Sogei-DevOps-pipeline.git

Path: unito-pipeline/cwl/main-unito.cwl

Branch/Commit ID: main
workflow graph chip-seq-alignment-bowtie.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/chip-seq-alignment-bowtie.cwl

Branch/Commit ID: master
workflow graph star_samtools_miso.cwl

https://github.com/rawgene/cwl.git

Path: workflows/star_samtools_miso.cwl

Branch/Commit ID: master
workflow graph contamination_foreign_chromosome

This workflow detect and remove foreign chromosome from a DNA fasta file

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/contamination-foreign-chromosome-blastn.cwl

Branch/Commit ID: master