Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 92118627c800e4addb7e29b9dabcca073a5bae71 |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a |
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Vcf concordance evaluation workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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kmer_cache_store
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 92118627c800e4addb7e29b9dabcca073a5bae71 |
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wf-variantcall.cwl
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https://github.com/farahzkhan/bcbio_test_cwlprov.git
Path: somatic/somatic-workflow/wf-variantcall.cwl Branch/Commit ID: 7c46d5c6ef6501dc0e07a9b740e9de64ffec83f5 |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3 |
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default-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: 1eb6bfe3c77aebaf69453a669d21ae7a5a78056f |
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varscan somatic workflow
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https://github.com/genome/analysis-workflows.git
Path: varscan/varscan.cwl Branch/Commit ID: 202b43b7449485a317c857d62ca7d39196764e65 |
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functional analysis prediction with InterProScan
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: workflows/functional_analysis.cwl Branch/Commit ID: 583307878ab83c5845c897f03db920ae8e1929e2 |
