Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph chipseq-pe.cwl

Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files.

https://github.com/Barski-lab/workflows.git

Path: workflows/chipseq-pe.cwl

Branch/Commit ID: 144eee15187c1a1145ce1ee0239da69059fd2752
workflow graph bacterial_kmer

https://github.com/ncbi/pgap.git

Path: bacterial_kmer/wf_bacterial_kmer.cwl

Branch/Commit ID: 8c21035bff3cbffccf5682bd0357a6d71f3bdb81
workflow graph assm_assm_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_assm_assm_blastn_wnode.cwl

Branch/Commit ID: 8c21035bff3cbffccf5682bd0357a6d71f3bdb81
workflow graph mpi_simple_wf.cwl

Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mpi_simple_wf.cwl

Branch/Commit ID: 256306a5da1eb0a8391d5f6734e7baae96922079
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: 8c21035bff3cbffccf5682bd0357a6d71f3bdb81
workflow graph rnaseq-se-dutp.cwl

Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-se-dutp.cwl

Branch/Commit ID: 94f3486d3867b9ece47c07bc8fe47f57569786f4
workflow graph revsortlcase.cwl

https://github.com/ResearchObject/runcrate.git

Path: cwl/revsortlcase/revsortlcase.cwl

Branch/Commit ID: e0da7976dfc711376d84d6dcb78e48a98c306814
workflow graph scatter-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/scatter-workflow.cwl

Branch/Commit ID: 9018ce7b7d964232b9e6543768a47623ab8c2eea
workflow graph step_valuefrom5_wf_with_id_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step_valuefrom5_wf_with_id_v1_2.cwl

Branch/Commit ID: 513bf79c9e3ba98306006a87165de18bac7c04ee
workflow graph kfdrc_alignment_wf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kfdrc_alignment_wf.cwl

Branch/Commit ID: 762c0718a7c506360423c3cb5477bd85826ea5de