Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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mergeAndMarkBams_4_1_3.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/mergeAndMarkBams_4_1_3.cwl Branch/Commit ID: 55f7d37e506d03fccaa1070f974e6368be4e68ef |
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somatic_subpipeline.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/somatic_subpipeline.cwl Branch/Commit ID: 55f7d37e506d03fccaa1070f974e6368be4e68ef |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 09774c78a965dd8f6c315597a53eef5998a3c1b6 |
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vardictSomaticVariantCaller_v0_1_0.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/vardictSomaticVariantCaller_v0_1_0.cwl Branch/Commit ID: 55f7d37e506d03fccaa1070f974e6368be4e68ef |
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spurious_annot pass2
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747 |
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CNV_FPS
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/workflow.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: d39017c63dd8e088f1ad3809d709529df602e05f |
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AltAnalyze CellHarmony
AltAnalyze CellHarmony ====================== |
https://github.com/datirium/workflows.git
Path: workflows/altanalyze-cellharmony.cwl Branch/Commit ID: 9e3c3e65c19873cd1ed3cf7cc3b94ebc75ae0cc5 |
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cnv_gridss
CNV GRIDSS calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/cnv_gridss.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46 |
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Chipseq alignment for nonhuman with qc and creating homer tag directory
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/chipseq_alignment_nonhuman.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
