Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph revsort.cwl

https://github.com/ResearchObject/runcrate.git

Path: cwl/revsortlcase/revsort.cwl

Branch/Commit ID: f9b20fdd7e0b76738845b4eff3435b3a37fa049f
workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: baa16f20e91a3f11f8475896e2a66cee183c0d7d
workflow graph Subworkflow to allow calling cnvkit with cram instead of bam files

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_cnvkit.cwl

Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
workflow graph umi molecular alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/molecular_qc.cwl

Branch/Commit ID: ffab5424bb8b5905aecf6f8e2e6387da7f3df562
workflow graph indexing_bed

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/indexing_bed.cwl

Branch/Commit ID: 992f84a959e1776acf3be77d2ca15fe11fa8673d
workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: 44ada20f3eeb59005d5bd999d2435102e9bae991
workflow graph kmer_ref_compare_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_ref_compare_wnode.cwl

Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df
workflow graph genomics-workspace-transcript.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_genomicsWorkspace/genomics-workspace-transcript.cwl

Branch/Commit ID: 6f0888f9e4b15172109dcb1db2ee63f154a79100
workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/pvacseq.cwl

Branch/Commit ID: bc3e2a0666812d541418a82d0dfc4f0bba595be3