Explore Workflows

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/cond-wf-004.1.cwl

Branch/Commit ID: afc644e143c697aefc006e7b94bc460e594fc588

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/env-wf3.cwl

Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/dynresreq-workflow.cwl

Branch/Commit ID: 639229b1159cf484e70e52da10194561b3fad719

Workflow to merge a large number of maf files into a single consensus bed file

https://github.com/mskcc/pluto-cwl.git

Path: cwl/consensus_bed.cwl

Branch/Commit ID: 9f7b5b5f985727a2df34ae86586c296ce757004c

Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.

https://github.com/Barski-lab/workflows.git

Path: tools/heatmap-prepare.cwl

Branch/Commit ID: a84cefded73e7c864ee2b6c7ab0604a0397462ec

https://github.com/reanahub/reana-demo-root6-roofit.git

Path: workflow/cwl/workflow-slurmcern.cwl

Branch/Commit ID: e7f76a5046f41ebcdf47c64fba014b996cc76de6

Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mpi_simple_wf.cwl

Branch/Commit ID: 7a058fed2987bc0046ffbc9a2b8a39b5b4fec6e1

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: a8abd0e66de7b5ffe24cfe7f39d7027103c6d3b4

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/js-expr-req-wf.cwl

Branch/Commit ID: a0f7d43bbc706af2a844be93fc19b2e4e4da626c

Packed ID: wf

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/ldv_linc_calibrator.cwl

Branch/Commit ID: 54a71dc9a5e4324301c2d85aea04647bbe4f3846