Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: 040a3d1a719736d7fce6db83702d3fb7f9d69eac
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55
workflow graph readgroups_bam_to_readgroups_fastq_lists.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl

Branch/Commit ID: d6c0acb0a5e8546dc96463c9d184ca96548e22b3
workflow graph super-enhancer.cwl

Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl)

https://github.com/datirium/workflows.git

Path: workflows/super-enhancer.cwl

Branch/Commit ID: db6abb2735f87614b870fca9990d36ea786cbbce
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 251343ee5b7586ba2cf89458555f1da87a7558f2
workflow graph apercal.cwl

https://github.com/apertif/apercal.git

Path: cwl/apercal.cwl

Branch/Commit ID: c6a8776bc6405f49554b0b62e1148fad2017eaf0
workflow graph 1st-workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: demo_workflow3/1st-workflow.cwl

Branch/Commit ID: 06dc1e7eed6720a5289faf0a00af73df843900e2