Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9 |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023 |
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transform.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/transform.cwl Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40 |
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wf52.cwl
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https://github.com/NCATS-Tangerine/ros.git
Path: ros/wf5/wf52.cwl Branch/Commit ID: c5973782bd2dac9530103295b2f9aad0778f366b |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546 |
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extract_readgroup_fastq_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515 |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023 |
