Explore Workflows

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Graph	Name	Retrieved From	View
	01-qc-se.cwl RNA-seq 01 QC - reads: SE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1
	Bisulfite alignment and QC	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a
	fp_filter workflow	https://github.com/genome/cancer-genomics-workflow.git Path: fp_filter/workflow.cwl Branch/Commit ID: be7e682c6a2d0b24b949e022aeae7786bd8434ed
	05-quantification-with-control.cwl ChIP-seq - Quantification - samples: treatment and control	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/05-quantification-with-control.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1
	01-qc-se.cwl RNA-seq 01 QC - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 1a0dd34d59ec983d1f7ad77bff35da2f016e3134
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 75ea689c0a8c9902b4598b453455857cb08e885a
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 75ea689c0a8c9902b4598b453455857cb08e885a
	WGS QC workflow nonhuman	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a
	idr.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: 793e327acc1d159ff601043ee88651fca62350dd