Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Raw sequence data to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: da335d9963418f7bedd84cb2791a0df1b3165ffe
	group-isoforms-batch.cwl Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.	https://github.com/datirium/workflows.git Path: tools/group-isoforms-batch.cwl Branch/Commit ID: 34d0ad68878b24aa1ffd8d8b8f7b8b2f5fd82787
	Cell Ranger Build Reference Indices Devel version of Cell Ranger Build Reference Indices pipeline =============================================================	https://github.com/datirium/workflows.git Path: workflows/cellranger-mkref.cwl Branch/Commit ID: a1f6ca50fcb0881781b3ba0306dd61ebf555eaba
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 6ac47e5703d8c8cdac698de91143829b3911e9b2
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: f2bd4687f06f85ea848b6f1ce04ec97f48525334
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 4f4448f71645275db5b84eb551990dfe3bf37cbb
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 953d7866bc70e14c02a6bb8c5a72305caa823bfc
	directory.cwl Inspect provided directory and return filenames. Generate a new directory and return it (including content).	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/directory.cwl Branch/Commit ID: c7c379948c02ba8f048d157f06eb903b1bda9894
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 953d7866bc70e14c02a6bb8c5a72305caa823bfc