Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Bisulfite alignment and QC

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
workflow graph umi molecular alignment workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/molecular_alignment.cwl

Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8
workflow graph etl_http.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/etl_http.cwl

Branch/Commit ID: 1326fb7fedca91a274fb7596c9052a4d279eacf9
workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0
workflow graph main-NA12878-platinum-chr20.cwl

https://github.com/BD2KGenomics/toil-workflows.git

Path: NA12878-platinum-chr20-workflow/main-NA12878-platinum-chr20.cwl

Branch/Commit ID: 42125c2912a176e61cb7ca53d9b1785f7a3826fa
workflow graph align_sort_sa

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_align_sort_sa.cwl

Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6
workflow graph phase VCF

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/phase_vcf.cwl

Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8
workflow graph step-valuefrom3-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl

Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c
workflow graph count-lines11-extra-step-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines11-extra-step-wf-noET.cwl

Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df
workflow graph kmer_build_tree

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_kmer_build_tree.cwl

Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236