Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph qiime2 create phylogenetic tree

Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-dada2-paired.cwl

Branch/Commit ID: ef08cb00bd55b4c712645d171dbc691e01ed6165

Packed ID: qiime2-05-phylogeny.cwl
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/wf-alignment.cwl

Branch/Commit ID: c4592973b1580e3ff44cb697f64b12345b91e6f5
workflow graph bgzip and index VCF

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/bgzip_and_index.cwl

Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31
workflow graph sgseq_cwl.cwl

https://github.com/rdocking/sgseq_cwl.git

Path: cwl/sgseq_cwl.cwl

Branch/Commit ID: f62143b03e08578049981abb81cd4705a895ede4
workflow graph Align reference proteins plane complete workflow

https://github.com/ncbi-gpipe/pgap.git

Path: protein_alignment/wf_protein_alignment.cwl

Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236
workflow graph integrity.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/integrity.cwl

Branch/Commit ID: 14558b578bad217685ae3c4807ead2a4392d0319
workflow graph wf-variantcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/wf-variantcall.cwl

Branch/Commit ID: c4592973b1580e3ff44cb697f64b12345b91e6f5
workflow graph Run tRNAScan

https://github.com/ncbi-gpipe/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236
workflow graph spurious_annot pass2

https://github.com/ncbi-gpipe/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: bf7e02ee89d1bb18462cefdbe0db41b09fe75236
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 0cf06f13527b380d21d0f335aaea3e564094ed8f