Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	iwdr_with_nested_dirs.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl Branch/Commit ID: ec2cf2da6c31ffedf827a0fb213b5204e172f510
	hisat2_index.cwl	https://github.com/rawgene/cwl.git Path: workflows/hisat2_index.cwl Branch/Commit ID: ff0e5dfe44fb85900b5563ab340de8ad3d952eb5
	bwa-alignment.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/bwa-alignment.cwl Branch/Commit ID: 5964544849c8def80fb47813e34ce185205fda94
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/integrity.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
	module-5	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-5.cwl Branch/Commit ID: 7a2864f5af7723657406e4f3e94f92db09ec90fc
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_download/workflow.cwl Branch/Commit ID: fa1014583e14c522af37ec120f428c3336ac689f
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: 3ed10d0ea7ac57550433a89a92bdbe756bdb0e40
	integrity.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae