Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Varscan Workflow
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https://github.com/mnneveau/cancer-genomics-workflow.git
Path: varscan/workflow.cwl Branch/Commit ID: master |
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rhapsody_targeted_1.9-beta.cwl#VDJ_Annotate_Reads.cwl
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https://github.com/longbow0/cwl.git
Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl Branch/Commit ID: master Packed ID: VDJ_Annotate_Reads.cwl |
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black-diamond-workflow.cwl
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https://github.com/ryantanaka/cwl-vs-dax-example.git
Path: black-diamond-workflow/cwl/black-diamond-workflow.cwl Branch/Commit ID: master |
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exomeseq-gatk4-01-preprocessing.cwl
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https://github.com/duke-gcb/bespin-cwl.git
Path: subworkflows/exomeseq-gatk4-01-preprocessing.cwl Branch/Commit ID: master |
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rsem_from_sra_wf.cwl
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https://github.com/inutano/sra-star-rsem.git
Path: analysis/processing/readcount/cwl/rsem_from_sra_wf.cwl Branch/Commit ID: master |
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final-workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: final-workflow.cwl Branch/Commit ID: master |
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Trim and reformat reads (single and paired end version)
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: workflows/trim_and_reformat_reads.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: c1f8b22 |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: master |
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Water body detection based on NDWI and otsu threshold
Water body detection based on NDWI and otsu threshold |
https://github.com/Terradue/ogc-eo-application-package-hands-on.git
Path: water-bodies/app-package.cwl Branch/Commit ID: master Packed ID: detect_water_body |
