Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: dc2c019c1aa24cc01b451a0f048cf94a35f163c4 |
|
|
|
exome alignment and germline variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 40097e1ed094c5b42b68f3db2ff2cbe78c182479 |
|
|
|
cluster_blastp_wnode and gpx_qdump combined
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19 |
|
|
|
process VCF workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 5677d6df78453e62d2e78ab485f216feaef91681 |
|
|
|
Execute CRISPR
|
https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: cabb1a9a95244e93294727be8cf5816c38992cb0 |
|
|
|
exome alignment and germline variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
|
|
|
cluster_blastp_wnode and gpx_qdump combined
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c |
|
|
|
01-qc-se.cwl
RNA-seq 01 QC - reads: SE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 33385c6a820a9d4d18cff6fc3a533ec8e3c11c6e |
|
|
|
cluster_blastp_wnode and gpx_qdump combined
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79 |
|
|
|
Run pindel on provided region
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
