Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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HS Metrics workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983 |
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steplevel-resreq.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: 8d8512061f2367c90aac67bcbf92af1061b4af59 |
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screen out taxa
Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files) |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/organism-screening.workflow.cwl Branch/Commit ID: 091374dc59a23966338638a668ae397d4ee20b2f |
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extract_amplicon_kit_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_amplicon_kit_http.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: be32f1363f9a9a9247d738e9593b207e9c5172c8 |
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steplevel-resreq.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: 280a852e74aec08cf79687e8004e17b1ab464534 |
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bam_readcount workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 51724b44c96e5fd849ae55b752865b80bc47d66c |
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mirna_profiling.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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Non-Coding Bacterial Genes
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 8cc9b995bca666c54c673a5eb8d9b8c6f8e84490 |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc |
