Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph HBA_target_VLBI.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/HBA_target_VLBI.cwl

Branch/Commit ID: 1ccaf1c3f2f90a359e043b33e700c35dfd06fe8c

workflow graph kmer_ref_compare_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_ref_compare_wnode.cwl

Branch/Commit ID: 13b411d94a568e52797ba936732dc65f1a91bd41

workflow graph Nested workflow example

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/nested.cwl

Branch/Commit ID: 190415a46a7249ab85fde87d797ec1ea688a8cc5

workflow graph concat.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target/concat.cwl

Branch/Commit ID: b139045507381d9fdaad02d719c7b9bfe809fec8

workflow graph sum-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/sum-wf-noET.cwl

Branch/Commit ID: 3867f2fa4c204bc99dc664bb3f0ba71e360e142e

workflow graph timelimit2-wf.cwl

The entire test should take ~24 seconds. Test that the 20 second time limit applies to each step individually (so 1st step has 20 seconds and the 2nd step has 20 seconds). So this 20 second time limit should not cause the workflow to fail. The timing on this test was updated from shorter values to accommodate the startup time of certain container runners, the previous timelimit of 5 seconds was too short, which is why it is now 20 seconds.

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/timelimit2-wf.cwl

Branch/Commit ID: 979083396fee912fca8ef778174216d317338a00

workflow graph dynresreq-workflow-stepdefault.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/dynresreq-workflow-stepdefault.cwl

Branch/Commit ID: 3867f2fa4c204bc99dc664bb3f0ba71e360e142e

workflow graph bacterial_orthology

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: 192b813eed8c0d368e69057cb39415175dd15128

workflow graph optional_src_mandatory_sink.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/optional_src_mandatory_sink.cwl

Branch/Commit ID: 190415a46a7249ab85fde87d797ec1ea688a8cc5

workflow graph bulk scRNA-seq pipeline using Salmon

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: bulk-pipeline.cwl

Branch/Commit ID: 639e5bfd8b8bad26aa30933607108245abf0dcc9