Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	fastqtosam_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1
	extract_amplicon_kit_http.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_amplicon_kit_http.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Varscan Workflow	https://github.com/litd/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 193b8de694f262ad55c7635a603c20c124748583
	Nested workflow example	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/nested.cwl Branch/Commit ID: 83038feb2a6fc3bab952e1ecc2a11bfbc8c557b4
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	WGS QC workflow mouse	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs_mouse.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 9143dc4ebacb9e1df36a712b0be6fa5d982b0c4f