Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Hello World

Puts a message into a file using echo

 https://github.com/common-workflow-language/cwlviewer.git

Path: src/test/resources/cwl/hello/hello.cwl

Branch/Commit ID: 3fd84017b645be6132736841441a246286f38c5a

Packed ID: main
workflow graph sar_coherence_parallel_test.cwl#main

Parallel InSAR coherence workflow: 1. Generate InSAR pairs from input date range and burst parameters 2. Process each pair in parallel (scatter) 2. STAC results (removed for now)

https://github.com/jzvolensky/s1-workflows.git

Path: cwl/sar_coherence_parallel_test.cwl

Branch/Commit ID: 0ce653f4a95dc8ac527af81674be9c2075d8f7a5

Packed ID: main
workflow graph pipeline.cwl

https://github.com/hubmapconsortium/hra-workflows.git

Path: pipeline.cwl

Branch/Commit ID: c2bca70870a3b9d33732d855c44957071eb3f799
workflow graph scatter-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: src/_includes/cwl/workflows/scatter-workflow.cwl

Branch/Commit ID: 5775004108e13bfd5d56f5feee994332ebdd503b
workflow graph align_and_count.cwl

https://github.com/common-workflow-lab/wdl-cwl-translator.git

Path: wdl2cwl/tests/cwl_files/align_and_count.cwl

Branch/Commit ID: f1fc33cf4aba1f3d777615030aa305a170d9f509
workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome.cwl

Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622
workflow graph QIIME2 Step 2 (Deblur option)

QIIME2 Deblur, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-deblur.cwl

Branch/Commit ID: c15f7d33153a36bf08509c3ea046d17ebe07c6bc

Packed ID: main
workflow graph pindel parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: baa16f20e91a3f11f8475896e2a66cee183c0d7d
workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: baa16f20e91a3f11f8475896e2a66cee183c0d7d
workflow graph Subworkflow to allow calling cnvkit with cram instead of bam files

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_cnvkit.cwl

Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d