Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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format_rrnas_from_seq_entry
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https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5 |
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merge-bam-parallel
This workflow merge BAM files per condition in parallel |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 06501cfc314e36749043431e67c2990966b452e0 |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: a79cec2331b3e17e382e8e5040405e8dd750c639 |
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MEME motif
This workflow uses MEME suite for motif finding |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/meme-motif.cwl Branch/Commit ID: 265440c63ab75d2451c90bcd116e725626e9a608 |
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extract_readgroup_fastq_pe_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_pe_http.cwl Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 551493f5c24b757a46cd22821a05e6ac6dcceb7f |
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kmer_cache_store
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48 |
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tt_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5 |
