Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph xenbase-chipseq-pe.cwl

XenBase workflow for analysing ChIP-Seq paired-end data

https://github.com/Barski-lab/workflows.git

Path: workflows/xenbase-chipseq-pe.cwl

Branch/Commit ID: 14d0618786c1499e8626f234341e99782a1e55c2
workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines4-wf.cwl

Branch/Commit ID: 979083396fee912fca8ef778174216d317338a00
workflow graph SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination

Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs.

https://github.com/Barski-lab/workflows.git

Path: tools/soupx-subworkflow.cwl

Branch/Commit ID: b8e28a017f7b1a2900ec0fd3b3549f123f0c91b4
workflow graph ocrevaluation-performance-wf.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/ocrevaluation-performance-wf.cwl

Branch/Commit ID: 5cff3f0e426635469d130c95d1222e9c54bdfd90
workflow graph pass-unconnected.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/pass-unconnected.cwl

Branch/Commit ID: 2b295864bc81b59b0698af8076474465afcf48d8
workflow graph directory.cwl

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: 6df3514cebcd94bf518b0ab7eaf220be1ca64afa
workflow graph Create Genomic Collection for Bacterial Pipeline

https://github.com/ncbi/pgap.git

Path: genomic_source/wf_genomic_source.cwl

Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
workflow graph iwdr-passthrough-successive.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/iwdr-passthrough-successive.cwl

Branch/Commit ID: 18b8fdf7d425d8e7d8986e08904ef09492798cf6
workflow graph kmer_gc_extract_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_gc_extract_wnode.cwl

Branch/Commit ID: 13b411d94a568e52797ba936732dc65f1a91bd41
workflow graph count-lines7-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/count-lines7-wf_v1_2.cwl

Branch/Commit ID: 039be8fe42daf65a3fc926af47e90ac975d02062