Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bam to trimmed fastqs

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl

Branch/Commit ID: downsample_and_recall
workflow graph pipeline_step4.cwl

https://github.com/Gibbsdavidl/CWL_scatter_example.git

Path: pipeline_step4.cwl

Branch/Commit ID: master
workflow graph bam_readcount workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/bam_readcount.cwl

Branch/Commit ID: downsample_and_recall
workflow graph Filter single sample sv vcf from paired read callers(Manta/Smoove)

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl

Branch/Commit ID: master
workflow graph nontrivial.cwl

https://github.com/dockstore-testing/tooltester-wes-testing.git

Path: nontrivial/nontrivial.cwl

Branch/Commit ID: stable-version-for-testing-v3
workflow graph move_and_validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/move_and_validate_interleaved_fq.cwl

Branch/Commit ID: 0.2.2
workflow graph ACTseq.cwl

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflows/ACTseq.cwl

Branch/Commit ID: master
workflow graph wf-svcall.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-svcall.cwl

Branch/Commit ID: master
workflow graph pcr-bottleneck-coef.cwl

ChIP-seq - map - PCR Bottleneck Coefficients

 https://github.com/duke-gcb/ggr-cwl.git

Path: v1.0/map/pcr-bottleneck-coef.cwl

Branch/Commit ID: v1.0.0
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: ca6ca61