Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gsnap_multilib.cwl
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Path: CWL/workflows/GSNAP/gsnap_multilib.cwl Branch/Commit ID: main |
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Subworkflow to allow calling cnvkit with cram instead of bam files
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Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: downsample_and_recall |
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Unaligned bam to sorted, markduped bam
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Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: downsample_and_recall |
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rRNA_selection.cwl
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Path: tools/rRNA_selection.cwl Branch/Commit ID: 0cd2d70 |
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echo-wc.cwl
Counts words of a message via echo and wc |
Path: tests/data/workflows/echo-wc.cwl Branch/Commit ID: master |
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01-qc-se.cwl
ChIP-seq 01 QC - reads: SE |
Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl Branch/Commit ID: master |
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snapanalysis_setup_and_analyze.cwl
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Path: steps/snapanalysis_setup_and_analyze.cwl Branch/Commit ID: v1.0 |
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biowardrobe_chipseq_se.cwl
Current workflow is used to run CHIP-Seq basic analysis with single-end input FASTQ file. In outputs it returns coordinate sorted BAM file alongside with index BAI file, quality statistics of the input FASTQ file, reads coverage in a form of BigWig file, peaks calling data in a form of narrowPeak or broadPeak files. |
Path: biowardrobe_chipseq_se.cwl Branch/Commit ID: v0.0.2 |
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analysis-workflow.cwl
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Path: cwl/analysis-workflow.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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Path: tools/tRNA_selection.cwl Branch/Commit ID: 3f85843 |
