Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git

Path: preprocess_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph EMG assembly for paired end Illumina

https://github.com/FarahZKhan/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: master
workflow graph tld.cwl

https://github.com/simleo/workflow-run-crate.git

Path: tools/cwlprov_to_crate/tld/tld.cwl

Branch/Commit ID: tld_workflow
workflow graph no-inputs-wf.cwl

Workflow without inputs.

 https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/no-inputs-wf.cwl

Branch/Commit ID: master
workflow graph mutect panel-of-normals workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/panel_of_normals.cwl

Branch/Commit ID: downsample_and_recall
workflow graph snapanalysis_setup_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snapanalysis_setup_and_analyze.cwl

Branch/Commit ID: bb023f9
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: steps/salmon-quantification.cwl

Branch/Commit ID: d18fd49
workflow graph Detect Docm variants

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph scatter-wf2.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-wf2.cwl

Branch/Commit ID: main
workflow graph workflow-pepinfo-backtranseq-cpgplot.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-pepinfo-backtranseq-cpgplot.cwl

Branch/Commit ID: master